Fungal Mutation Explains Resistance

Early blight, caused by Alternaria solani, is an important foliar
disease of potato and other crops. Alternating wet and dry periods provided by
consistent dew formation are particularly favorable for the development of the
disease. As a result, yield losses of 30 percent caused by early blight have
been reported. Few potato cultivars are resistant to the disease; therefore,
early blight is managed primarily through the use of foliar fungicides.
Broad-spectrum fungicides such as chlorothalonil and mancozeb control early
blight disease under moderate disease pressure but not always under irrigated
potato production. As a result, in the late 1990s, potato producers took
advantage of the high level of disease control (>90%) provided by strobilurin
fungicide chemistry (Q(o)I fungicides) such as azoxystrobin (Quadris®) and
pyraclostrobin (Headline®). In 2000, one year after the registration of the
first strobilurin fungicide, isolated potato fields were identified with
significant levels of early blight despite several applications of Quadris® made
on the crop.
Isolates of A. solani recovered from these fields, and from other
fields throughout the Midwest in 2001, confirmed that the early blight fungus
had reduced-sensitivity to azoxystrobin due to the presence of the F129L
mutation. Previous studies confirmed that azoxystrobin reduced-sensitive
isolates are also reduced in sensitivity to pyraclostrobin (Headline®) but less
so to trifloxystrobin (Gem®). In recent studies, it has been demonstrated that
this mutation does not appreciably affect disease control provided by the
non-strobilurin Q(o)I fungicides famoxadone (Tanos®) and fenamidone (Reason®).
Early blight disease control provided by famoxadone is significantly better than
the level of control provided by fenamidone, primarily due to higher intrinsic
activity on the early blight fungus. Interestingly, A. solani isolates
possessing the F129L mutation are significantly more sensitive to boscalid
(Endura®) in vitro than the sensitive wild-type. Fungicide rotations of
famoxadone and boscalid may be effective in slowing the development of
resistance in A. solani to both chemistries. (Plant Disease, March
2005).